• Gloeothece Nägeli, 1849
• Gloeothece abiscoensis (Skuja) Komárek & Anagnostidis, 1995
• Gloeothece baileyana Schmidle, 1896
• Gloeothece caldariorum (Richter) Hollerbach, 1938 accepted as Aphanothece caldariorum Richter, 1880
• Gloeothece coerulea Geitler
• Gloeothece composita (G.M. Smith) Martens & Pankow, 1972 accepted as Rhabdoderma compositum (G.M. Smith) Fedorov, 1967
• Gloeothece confluens Nägeli, 1849
• Gloeothece cyanochroa Komárek, 1995
• Gloeothece cystifera (Hassall) Rabenhorst, 1865
• Gloeothece distans Stizenberger, 1860
• Gloeothece dubia (Wartmann) Geitler, 1932
• Gloeothece endochromatica Gardner, 1927
• Gloeothece filiformis C.L. Sant'Anna, L.H.Z. Branco & S.M.F. Silva, 1991
• Gloeothece fujianica H.W. Liang
• Gloeothece fuscolutea Nägeli, 1849
• Gloeothece goeppertiana (Hilse) Forti, 1907
• Gloeothece heuflerii Grunow, 1865 accepted as Aphanothece castagnei (Brébisson) Rabenhorst, 1865
• Gloeothece incerta Skuja, 1964
• Gloeothece interspersa Gardner, 1927
• Gloeothece kriegeri Frémy, 1932
• Gloeothece lacustris G.B. McGregor
• Gloeothece linearis Nägeli, 1849
• Gloeothece lunata W. West & G.S. West, 1894
• Gloeothece membranacea (Rabenhorst) Bornet, 1892
• Gloeothece monococca (Kützing) Rabenhorst, 1865
• Gloeothece neocaledoniensis A. Couté, G. Tell & Y. Thérézien
• Gloeothece opalothecata Gardner, 1927
• Gloeothece palea (Kützing) Nägeli, 1849
• Gloeothece parvula Gardner, 1927
• Gloeothece prototypa Gardner, 1927
• Gloeothece rhodochlamys Skuja, 1949
• Gloeothece rupestris (Lyngbye) Bornet, 1880
• Gloeothece samoensis Wille, 1913
• Gloeothece subtilis Skuja, 1964
• Gloeothece tepidariorum (A. Braun) Lagerheim, 1883
• Gloeothece tophacea Skuja, 1937
• Gloeothece transsylvanica Kol, 1955 accepted as Rhabdoderma transsylvanicum (Kol) Komárek & Anagnostidis, 1995
• Gloeothece ustulata Beck-Mannagetta, 1929
• Gloeothece vibrio N. Carter, 1922
• Gloeothece violacea Rabenhorst, 1865
• Gloeotheceopsis Y. Zhang, 1988 †