• Hypoaspis Berlese, 1903 (uncertain) [Family: Arachnida (awaiting allocation)]
• Hypoaspis Canestrini, 1884 [Family: Laelapidae]
• Hypolabis Förster, 1862 (uncertain)
• Hypolaepus Kirby, 1882 (uncertain)
• Hypolais Guenée, 1854 (uncertain) [Family: Lepidoptera (awaiting allocation)]
• Hypolais Kaup, 1829 accepted as Hippolais Balderstein, 1827 [Family: Sylviidae]
• Hypolepia Guenée, 1845 (uncertain)
• Hypolepis Bernhardi, 1805 [Family: Dennstaedtiaceae]
• Hypolepis C.G.D. Nees, 1829 accepted as Hypogynium C.G.D. Nees, 1829 accepted as Andropogon Linnaeus, 1753 [Family: Poaceae]
• Hypolepis Palisot de Beauvois ex T.G. Lestiboudois, 1819 accepted as Ficinia H.A. Schrader, 1832 [Family: Cyperaceae]
• Hypolepis Persoon, 1807 accepted as Cytinus Linnaeus, 1764 [Family: Rafflesiaceae]
• Hypolepis Warren, 1904 accepted as Psaliodes Guenée, 1857 [Family: Geometridae]
• Hypolimas (uncertain)
• Hypolitis Hargitt, 1901 accepted as Hypolytus Murbach, 1899 accepted as Euphysa Forbes, 1848
• Hypolixus Desbrochers, 1898
• Hypolixus Petri, 1904 accepted as Gasteroclisus Desbrochers, 1904
• Hypomixis Wittmer, 1995
• Hypsolepis Agassiz, 1854 accepted as Luxilus Rafinesque, 1820