• Protomyces Unger, 1832
• Protomyces alismatis (Nees) anon. accepted as Doassansia alismatis (Nees) Cornu, 1883
• Protomyces ari Cooke, 1872 accepted as Melanotaenium ari (Cooke) Magnus
• Protomyces calendulae Oudem., 1873 accepted as Entyloma calendulae (Oudem.) de Bary, 1874
• Protomyces chrysosplenii Berk. & Broome, 1875 accepted as Entyloma chrysosplenii (Berk. & Broome) J. Schröt., 1877
• Protomyces comari Berk. accepted as Physoderma comari (Berk. & F.B. White) Lagerb., 1934
• Protomyces endogenus Unger, 1833 accepted as Melanotaenium endogenum (Unger) de Bary, 1874
• Protomyces fergussonii Berk. & Broome, 1875 accepted as Entyloma fergussonii (Berk. & Broome) Plowr., 1889
• Protomyces ficariae Cornu & Roze, 1874 accepted as Entyloma ficariae A.A. Fisch. Waldh., 1877
• Protomyces filicinus Niessl, 1873 accepted as Uredinopsis filicina (Niessl) Magnus, 1893
• Protomyces galii Rabenh., 1837 accepted as Melanotaenium endogenum (Unger) de Bary, 1874
• Protomyces graminicola Sacc., 1876 accepted as Sclerospora graminicola (Sacc.) J. Schröt., 1886
• Protomyces inundatus P.A. Dang., 1906 accepted as Burenia inundata (P.A. Dang.) M.S. Reddy & C.L. Kramer, 1975
• Protomyces lactucae-debilis Sawada, 1925
• Protomyces leucanthemi (Magnus) Arx, 1981 accepted as Protomycopsis leucanthemi Magnus, 1905
• Protomyces limosellae Kunze, 1873 accepted as Doassansia limosellae (J. Kunze) J. Schröt., 1888
• Protomyces macropus Unger accepted as Protomyces macrosporus Unger, 1834
• Protomyces macrosporus Unger, 1834
• Protomyces macularis (Wallr.) Sacc. accepted as Physoderma maculare Wallr., 1833
• Protomyces martianoffianus Thüm., 1878 accepted as Doassansiopsis hydrophila (A. Dietr.) Lavrov, 1897
• Protomyces microsporus (Unger) Cooke, 1833 accepted as Entyloma microsporum (Unger) J. Schröt., 1874
• Protomyces microsporus Unger, 1833 accepted as Entyloma microsporum (Unger) J. Schröt., 1874
• Protomyces pachydermus Thüm., 1874
• Protomyces purpureotingens Massee accepted as Protomycopsis purpureotingens (Massee) Ramsb., 1917
• Protomyces rhaeticus (Volkart) Arx, 1981 accepted as Volkartia rhaetica (Volkart) Maire, 1909
• Protomyces sagittariae (Fuckel) Fuckel, 1870 accepted as Doassansia sagittariae (Westend.) J.C. Fisch., 1884
• Protomyces umbelliferarum (Rostr.) Arx, 1981 accepted as Taphridium umbelliferarum (Rostr.) Lagerh. & Juel, 1902