• Acrodontium abietis (B. Sutton) de Hoog, 1974
• Acrodontium antarcticum Cabello, 1989
• Acrodontium crateriforme (J.F.H. Beyma) de Hoog, 1972
• Acrodontium echinulatum P.M. Kirk, 1983
• Acrodontium griseum (Fassat.) de Hoog, 1972 accepted as Tritirachium heimii (Saccas) Langeron, 1949
• Acrodontium hydnicola (Peck) de Hoog, 1972
• Acrodontium intermissum de Hoog & V. Rao, 1975
• Acrodontium salmoneum de Hoog, 1972
• Acrodontium simplex (F. Mangenot) de Hoog, 1972
• Acrodontium virellum (Fr.) de Hoog, 1972
• Acrotheca acuta Grove accepted as Pleurophragmium acutum (Grove) M.B. Ellis, 1976
• Acrotheca aquaspersa Borelli, 1972 accepted as Rhinocladiella aquaspersa (Borelli) Schell, McGinnis & Borelli, 1983
• Acrotheca cerophila Tubaki, 1958 accepted as Ramichloridium cerophilum (Tubaki) de Hoog, 1977
• Acrotheca multispora (Preuss) Sacc., 1886 accepted as Neta quadriguttata (Matsush.) de Hoog, 1985
• Acrotheca pedrosoi (Brumpt) Fonseca & Leão, 1923 accepted as Phialophora pedrosoi (Brumpt) Redaelli & Cif., 1941
• Acrotheca zignoëllae Höhn. accepted as Cylindrotrichum zignoëllae (Höhn.) W. Gams & Hol.-Jech., 1976
• Anguillosporella coryli (Redhead & G.P. White) U. Braun, 1995
• Anguillosporella vermiformis (Davis) U. Braun, 1995
• Ascospora asteroma (Fr.) Fuckel accepted as Mycosphaerella asteroma (Fr.) Lindau
• Ascospora beijerinckii Vuill., 1888 accepted as Stigmina carpophila (Lév.) M.B. Ellis, 1959
• Ascospora crateriformis Durieu & Mont. accepted as Coleophoma crateriformis (Durieu & Mont.) Höhn., 1925
• Ascospora melaena (Fr.) G. Winter, 1885 accepted as Omphalospora melaena (Fr.) Höhn., 1919
• Ascospora ostruthii (Fr.) Fr., 1849 accepted as Stigmatea ostruthii (Fr.) Oudem. ex Sacc., 1882
• Ascospora rubi (Westend.) Zeller, 1927 accepted as Discostroma corticola (Fuckel) Brockmann, 1976
• Ascospora scolopendrii Fuckel, 1873 accepted as Milesina scolopendrii (Faull) D.M. Hend., 1961
• Ascospora solieri Mont., 1849 accepted as Phoma solieri (Mont.) Sacc., 1879
• Asperisporium caricae (Speg.) Maubl., 1913
• Asperisporium juniperinum (Georgescu & Badea) B. Sutton & Hodges, 1990 accepted as Stigmina juniperina (Georgescu & Badea) M.B. Ellis, 1959
• Asperisporium mikaniae (Ellis & Everh.) R.W. Barreto, 1995
• Asperisporium mikaniigena (J.M. Yen & Lim) R.W. Barreto, 1995
• Asperisporium sequoiae (Ellis & Everh.) B. Sutton & Hodges, 1990
• Aulographina eucalypti (Cooke & Massee) Arx & E. Müll., 1960
• Aulographina pinorum (Desm.) Arx & E. Müll., 1960
• Bryochiton heliotropicus Döbbeler, 1978
• Bryochiton microscopicus Döbbeler & Poelt, 1978
• Bryochiton monascus Döbbeler & Poelt, 1978
• Bryochiton perpusillus Döbbeler, 1978
• Bryopelta variabilis Döbbeler & Poelt, 1978
• Capnobotryella renispora Sugiy., 1987
• Capnobotryella sessilispora (S. Hughes & Y. Hirats.) Sugiy., 1987
• Cercodeuterospora trichophila Curzi, 1932 accepted as Mycovellosiella cajani Henn., 1931
• Cercoseptoria capsellae (Ellis & Everh.) H.C. Greene, 1959 accepted as Pseudocercosporella capsellae (Ellis & Everh.) Deighton, 1973
• Cercoseptoria caryigena (Ellis & Everh.) Davis, 1937 accepted as Mycosphaerella caryigena Demaree & Cole, 1932
• Cercoseptoria egenula Syd., 1935 accepted as Paracercospora egenula (Syd.) Deighton, 1979
• Cercoseptoria handelii (Bubák) Deighton, 1976 accepted as Cercospora handelii Bubák, 1909
• Cercoseptoria ligustrina (Boerema) Arx, 1981 accepted as Cercospora ligustrina Boerema, 1962
• Cercoseptoria moravica Petr., 1934 accepted as Cercospora moravica (Petr.) U. Braun, 1993
• Cercoseptoria oxyriae (Trail) Gjaerum, 1971 accepted as Pseudocercosporella oxyriae (Trail) U. Braun, 1988
• Cercoseptoria pini-densiflorae (Hori & Nambu) Deighton, 1976 accepted as Mycosphaerella gibsonii H.C. Evans, 1984
• Cercoseptoria theae (Cavara) Curzi, 1929
• Cercoseptoria tinea (Sacc.) Deighton, 1976 accepted as Stigmina tinea (Sacc.) M.B. Ellis, 1976
• Cercoseptoria vermiformis (Davis) Davis, 1942 accepted as Anguillosporella vermiformis (Davis) U. Braun, 1995
• Cercosphaerella millegrana (Cooke) Kleb. accepted as Mycosphaerella microsora Syd. & P. Syd., 1940
• Cercospora abelmoschi Ellis & Everh., 1893
• Cercospora acerina R. Hartig, 1880 accepted as Mycocentrospora acerina (R. Hartig) Deighton, 1972
• Cercospora albidomaculans G. Winter, 1885 accepted as Cercospora ricinella Sacc. & Berl., 1885
• Cercospora albomaculans Ellis & Everh., 1894 accepted as Pseudocercosporella capsellae (Ellis & Everh.) Deighton, 1973
• Cercospora althaeina Sacc., 1878
• Cercospora ampelopsidis Peck, 1878
• Cercospora angolensis T. Carvalho & O. Mendes, 1953 accepted as Phaeoramularia angolensis (T. Carvalho & O. Mendes) P.M. Kirk, 1986
• Cercospora apii Fresen., 1863
• Cercospora ari (Fautrey) Vasyag., 1975 accepted as Ramularia ari Fautrey, 1892
• Cercospora ariminensis Cavara, 1899
• Cercospora armoraciae Sacc., 1876
• Cercospora asparagi Sacc., 1877
• Cercospora asparagicola (Speg.) Vassiljevsky, 1937 accepted as Cercospora asparagi Sacc., 1877
• Cercospora astragali Woron., 1927
• Cercospora aurantia Heald & F.A. Wolf, 1911
• Cercospora bacilligera (Berk. & Broome) Wollenw., 1916 accepted as Fusisporium bacilligerum Berk. & Broome, 1850
• Cercospora batatas Zimm., 1904 accepted as Phaeoisariopsis bataticola (Cif. & Bruner) M.B. Ellis, 1976
• Cercospora bataticola Cif. & Bruner, 1931 accepted as Phaeoisariopsis bataticola (Cif. & Bruner) M.B. Ellis, 1976
• Cercospora bellynckii (Westend.) Sacc., 1876 accepted as Mycovellosiella bellynckii (Westend.) Constant., 1982
• Cercospora berteroae Hollós, 1907
• Cercospora beticola Sacc., 1876
• Cercospora bizzozeriana Sacc. & Berl., 1888
• Cercospora bloxamii Berk. & Broome accepted as Cercospora brassicicola Henn., 1905
• Cercospora bougainvilleae Munt.-Cvetk., 1957 accepted as Cercosporidium bougainvilleae (Munt.-Cvetk.) Sobers & C.P. Seym., 1969
• Cercospora brachycarpa Syd., 1930 accepted as Mycovellosiella brachycarpa (Syd.) Deighton, 1974
• Cercospora brachypoda Speg., 1882
• Cercospora brassicae (Fautrey & Roum.) Chupp, 1960 accepted as Pseudocercosporella capsellae (Ellis & Everh.) Deighton, 1973
• Cercospora brassicicola Henn., 1905
• Cercospora cajani Henn., 1902 accepted as Mycovellosiella cajani Henn., 1931
• Cercospora calendulae Sacc., 1878
• Cercospora calotropidis Ellis & Everh., 1898
• Cercospora canescens Ellis & G. Martin, 1882
• Cercospora cannae C.K. Bai, X.J. Liu & Y.L. Guo, 1984
• Cercospora cantuariensis E.S. Salmon & Wormald, 1923
• Cercospora capensis (Thüm.) Sacc., 1886 accepted as Pleurophragmium capense (Thüm.) S. Hughes, 1958
• Cercospora capsici Heald & F.A. Wolf, 1911
• Cercospora capsici Marchal & Steyaert, 1929 accepted as Phaeoramularia capsicicola (Vassiljevsky) Deighton, 1976
• Cercospora capsicicola Vassiljevsky, 1937 accepted as Phaeoramularia capsicicola (Vassiljevsky) Deighton, 1976
• Cercospora carbonacea Miles, 1917
• Cercospora cardamines Losa, 1945
• Cercospora cari Westerd., 1924 accepted as Mycocentrospora acerina (R. Hartig) Deighton, 1972
• Cercospora caribaea Cif., 1935 accepted as Phaeoramularia manihotis (F. Stevens & Solheim) M.B. Ellis, 1976
• Cercospora caricae Speg., 1886 accepted as Asperisporium caricae (Speg.) Maubl., 1913
• Cercospora caricis Dearn. & House, 1892
• Cercospora carotae (Pass.) Kazn. & Siemaszko, 1929
• Cercospora carthami Sundaram & T.S. Ramakr., 1928
• Cercospora caulicola G. Winter accepted as Cercospora asparagi Sacc., 1877