• Cyanobacterium aponinum I. Moro, N. Rascio, N. LaRocca, M. DiBella & C. Andreoli, 2007
• Cyanobacterium cedrorum (Sauvageau) Komárek, Kopecky & Cepák
• Cyanobacterium crassiusculum (Skuja) J. Komárek, J. Kopecký & V. Cepák
• Cyanobacterium diachloros (Skuja) J. Komárek, J. Kopecký & V. Cepák
• Cyanobacterium formosanum J. Komárek, 1999
• Cyanobacterium minervae (J.J. Copeland) J. Komárek, J. Kopecký & V. Cepák, 1999
• Cyanobacterium notatum (Skuja) J. Komárek, J. Kopecký & V. Cepák, 1999
• Cyanobacterium stanieri R. Rippka & G. Cohen-Bazire, 1983
• Cyanobacterium synechococcoides J. Komárek, 1999
• Geminocystis herdmanii Korelusová, Kastovský & Komárek, 2009
• Geminocystis papuanica Korelusová, Kastovský & Komárek, 2009
• Holopedia clementei Geurrero, 1946
• Holopedia clementei P. González, 1945
• Holopedia dednensis Pevalek, 1925
• Holopedia geminata (Lagerheim) Lagerheim, 1893 accepted as Microcrocis geminata (Lagerheim) Geitler, 1942
• Holopedia mutisiana Geurrero, 1946
• Holopedia mutisiana P. González, 1945
• Holopedia sabulicola (Lagerheim) Kirchner, 1900 accepted as Microcrocis sabulicola (Lagerheim) Geitler, 1942
• Holopedium bellum Beck-Mannagetta, 1929 accepted as Microcrocis bella (Beck-Mannagetta) Komárek & Anagnostidis, 1995
• Holopedium dietelii (Richter) Migula, 1905 accepted as Microcrocis geminata (Lagerheim) Geitler, 1942
• Holopedium granulata Skuja, 1948 accepted as Microcrocis granulata (Skuja) Skuja, 1966
• Holopedium irregularis Lagerheim
• Holopedium obvolutum Tiffany, 1934 accepted as Microcrocis obvoluta (Tiffany) T.H. Frank & A.G. Landman, 1988
• Holopedium pulchellum Buell, 1938 accepted as Microcrocis pulchella (Buell) Geitler, 1942
• Microcrocis bella (Beck-Mannagetta) Geitler, 1964 accepted as Microcrocis bella (Beck-Mannagetta) Komárek & Anagnostidis, 1995
• Microcrocis bella (Beck-Mannagetta) Komárek & Anagnostidis, 1995
• Microcrocis dietelii P. Richter, 1892 accepted as Microcrocis geminata (Lagerheim) Geitler, 1942
• Microcrocis geminata (Lagerheim) Geitler, 1942
• Microcrocis gigas (Ryppowa) Komárek & Anagnostidis, 1995
• Microcrocis granulata (Skuja) Skuja, 1966
• Microcrocis irregilaris (Lagerheim) Geitler
• Microcrocis irregularis (Lagerheim) Geitler, 1942
• Microcrocis marina (Lagerheim) Komárek & Anagnostidis, 1995
• Microcrocis obvoluta (Tiffany) T.H. Frank & A.G. Landman, 1988
• Microcrocis pulchella (Buell) Geitler, 1942
• Microcrocis sabulicola (Lagerheim) Geitler, 1942
• Microcrocis solea (Komarenko) Komárek & Anagnostidis, 1995
• Microcrocis subulicola (Lagerh.) Geitler accepted as Microcrocis sabulicola (Lagerheim) Geitler, 1942
• Pseudoholopedia convoluta (Brébisson) Elenkin, 1938 accepted as