Between brackets is the number of accepted species
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- Biota
- Kingdom Animalia
- Kingdom Archaea
- Kingdom Bacteria
- Kingdom Chromista
- Kingdom Fungi
- Kingdom Plantae
- Phylum Acritarcha †
- Phylum Algae (awaiting allocation)
- Phylum Algae incertae sedis
- Phylum Anthocerotophyta
- Phylum Bryophyta
- Class Andreaeobryopsida
- Class Andreaeopsida
- Class Bryophyta (awaiting allocation)
- Class Bryopsida
- Order Archidiales
- Order Aulacomniales accepted as Rhizogoniales
- Order Bryales
- Order Bryopsida (awaiting allocation)
- Order Buxbaumiales
- Order Dawsoniales
- Order Dicranales
- Order Encalyptales
- Order Fissidentales
- Order Funariales
- Order Grimmiales
- Order Hedwigiales
- Order Hookeriales
- Order Hypnales
- Order Hypnobryales
- Family Acrocladiaceae R. Tangney, D. Quandt, S. Huttunen & M. Stech in Tangney et al., 2010
- Family Amblystegiaceae
- Family Brachytheciaceae
- Genus Achrolepis (S.O. Lindberg) J. Cardot, 1904
- Genus Aerolindigia M. Menzel, 1991
- Genus Astrodontium Dozy & Molkenboer, 1844
- Genus Bestia V.F. Brotherus in Engler & Prantl, 1906
- Genus Brachytheciastrum M.S. Ignatov & S. Huttunen, 2002
- Genus Brachytheciella M.S. Ignatov, 1999
- Genus Brachytheciites J.-P. Frahm, 2005 †
- Genus Brachythecium W.P. Schimper in Bruch, W.P. Schimper & Gümbel, 1853
- Genus Bryhnia Kaurin, 1892
- Genus Bryoandersonia H.E. Robinson, 1963
- Species Bryoandersonia illecebra H. Robinson, 1962 [1963]
- Genus Bryostreimannia R. Ochyra, 1991
- Genus Burnettia Grout, 1903
- Genus Catagoniopsis V.F. Brotherus in Engler & Prantl, 1908
- Genus Chamberlainia Grout, 1928
- Genus Chionobryum Glowacki, 1913
- Genus Cratoneurella H.E. Robinson, 1963
- Genus Cryptoneurum Thériot & P. Varde, 1944
- Genus Eriodon Montagne, 1845 accepted as Rhynchostegium W.P. Schimper in Bruch et al., 1852
- Genus Eurhynchiadelphus M.S. Ignatov, S. Huttunen & T.J. Koponen, 2002
- Genus Eurhynchiastrum M.S. Ignatov & S. Huttunen, 2002
- Genus Eurhynchiella M. Fleischer, 1923 accepted as Rhynchostegium W.P. Schimper in Bruch et al., 1852
- Genus Flabellidium Herzog, 1916
- Genus Frahmiella M.S. Ignatov, A. Vanderpoorten & Y.-F. Wang in Ignatov et al., 2010
- Genus Hedenaesia S.M. Huttunen & M.S. Ignatov, 2010
- Genus Hedenasiastrum M.S. Ignatov & A. Vanderpoorten, 2009
- Genus Homalotheciella (J. Cardot) V.F. Brotherus in Engler & Prantl, 1908
- Genus Homalothecium W.P. Schimper in Bruch, W.P. Schimper & Gümbel, 1851
- Genus Iishibaea E. Iishiba, 1934
- Genus Isopterygium Mitten, 1869
- Genus Isothecium S.E. Bridel, 1827
- Genus Kindbergia R. Ochyra, 1982
- Genus Kurohimehypnum K. Sakurai, 1950
- Genus Lephthymenium I. Hagen, 1910 accepted as Leptohymenium Schwägrichen, 1828
- Genus Lepidopilum (S.E. Bridel) S.E. Bridel, 1827
- Genus Leptohymenium Schwägrichen, 1828
- Genus Lepyrodontopsis V.F. Brotherus in Engler & Prantl, 1925
- Genus Lindigia Hampe, 1861-1862
- Genus Mandoniella Herzog, 1916
- Genus Meteorium (S.E. Bridel) Dozy & Molkenboer, 1848
- Genus Microeurhynchium M.S. Ignatov & A. Vanderpoorten, 2009
- Genus Myuroclada Bescherelle, 1893
- Genus Nobregaea L. Hedenäs, 1992
- Genus Okamuraea V.F. Brotherus, 1906
- Genus Orthothecium W.P. Schimper in Bruch et al., 1851
- Genus Oticodium (Müller Hal.) Kindberg, 1888
- Genus Oxyrrhynchium (W.P. Schimper) Warnstorf, 1905
- Genus Palamocladium Müller Hal., 1896
- Genus Panckowia J.J. Kickx ex W. Mönkemeyer, 1931 accepted as Pancovia Necker ex Kickx, 1867
- Genus Pancovia Necker ex Kickx, 1867
- Genus Paramyurium (Limpricht) Warnstorf, 1905
- Genus Plasteurhynchium Fleischer ex Brotherus in Engler & Prantl, 1925
- Genus Platygyrium W.P. Schimper in Bruch et al., 1851
- Genus Platyhypnidium M. Fleischer, 1923 accepted as Rhynchostegium W.P. Schimper in Bruch et al., 1852
- Genus Pleuropus W. Griffith, 1842
- Genus Pseudisothecium Grout, 1928
- Genus Pseudopleuropus Takaki, 1955
- Genus Pseudorhynchostegiella M.S. Ignatov & A. Vanderpoorten, 2009
- Genus Ptychodium W.P. Schimper, 1860
- Genus Remyella Müller Hal., 1896 accepted as Rhynchostegiella (W.P. Schimper) Limpricht, 1896
- Genus Rhaphidostegium (W.P. Schimper) De Notaris, 1867
- Genus Rhynchocarpidium P. Varde & Leroy, 1947
- Genus Sainthelenia M.S. Ignatov & M.J. Wigginton in Ignatov et al., 2009
- Genus Schimperella Thériot, 1926
- Genus Sciurohypnum Hampe, 1874 accepted as Sciuro-Hypnum Hampe, 1874
- Genus Sciuro-Hypnum Hampe, 1874
- Genus Scleropodiopsis M.S. Ignatov, 1998
- Genus Scorpiurium W.P. Schimper, 1876
- Genus Steerecleus H.E. Robinson, 1987
- Genus Stenocarpidiopsis M. Fleischer ex V.F. Brotherus, 1925
- Genus Stereophyllum Mitten, 1859
- Genus Stokesiella (Kindberg) H.E. Robinson, 1967
- Genus Streimannia R. Ochyra, 1990
- Genus Taxicaulis (Müller Hal.) Müller Hal. in F. Reinecke, 1896
- Genus Tomenthypnum Loeske, 1911 accepted as Tomentypnum Loeske, 1911
- Genus Tomentypnum Loeske, 1911
- Genus Trachybryum (V.F. Brotherus) W.B. Schofield, 1968
- Genus Tripterocladium (Müller Hal.) A. Jaeger, 1880
- Genus Unclejackia M.S. Ignatov, T.J. Koponen & D.H. Norris, 1999
- Family Callicladiaceae J. Kučera & M.S. Ignatov in Kučera et al., 2019
- Family Donrichardsiaceae †
- Family Echinodiaceae
- Family Entodontaceae
- Family Hylocomiaceae
- Family Hypnaceae
- Family Hypnobartlettiaceae
- Family Hypnobryales (awaiting allocation)
- Family Jocheniaceae J. Kučera & M.S. Ignatov in Kučera et al., 2019
- Family Lembophyllaceae
- Family Leucomiaceae
- Family Myriniaceae
- Family Plagiotheciaceae
- Family Pleuroziopsaceae
- Family Pleuroziopsidaceae
- Family Racopilaceae
- Family Rhytidiaceae
- Family Rigodiaceae
- Family Scorpidiaceae Ignatov & Ignatova, 2004
- Family Stereodontaceae S. Schlesak, L. Hedenäs, M. Nebel & D. Quandt, 2018
- Family Thuidiaceae
- Order Isobryales
- Order Leucodontales
- Order Orthodontiales accepted as Rhizogoniales
- Order Orthotrichales
- Order Pleurocarpae (awaiting allocation)
- Order Pottiales
- Order Protosphagnales †
- Order Pseudoditrichales
- Order Rhizogoniales
- Order Scouleriales
- Order Seligeriales accepted as Grimmiales
- Order Splachnales
- Family Flexitrichaceae M.S. Ignatov & V.E. Fedosov in Fedosov et al., 2016
- Family Tricostaceae G.W.K. Shelton, R.A. Stockey, G.R. Rothwell & A.M.F. Tomescu, 2015 †
- Genus Capimirinus I.C. Christiano De Souza, F.S. Ricardi Branco & Y.L. Vargas, 2012 †
- Genus Livingstonites E.I. Vera, 2011 †
- Genus Vetiplanaxis N.E. Bell in N.E. Bell & P.V. York, 2007 †
- Class Hepaticopsida accepted as Marchantiophyta
- Class Oedipodiopsida
- Class Polytrichopsida
- Class Sphagnopsida
- Class Takakiopsida
- Class Tetraphidopsida
- Genus Heinrichsiella A.C. Bippus, A. Savoretti, I.H. Escapa, J. Garcia-Massini & D. Guido, 2019 †
- Phylum Calcitarcha †
- Phylum Charophyta
- Phylum Chlorophyta
- Phylum Eophyta †
- Phylum Glaucophyta
- Phylum Gymnospermophyta accepted as Tracheophyta
- Phylum Horneophyta †
- Phylum Magnoliophyta accepted as Tracheophyta
- Phylum Marchantiophyta
- Phylum Picozoa
- Phylum Plantae (awaiting allocation)
- Phylum Prasinodermatophyta
- Phylum Pteridophyta accepted as Tracheophyta
- Phylum Rhodelphidia
- Phylum Rhodophyta
- Phylum Sporae dispersae †
- Phylum Tracheophyta
- Phylum Vendophyta † accepted as Algae incertae sedis
- Class Nematophyceae † accepted as Nematophyta †
- Kingdom Protista accepted as Protozoa
- Kingdom Protozoa
- Kingdom Viruses
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