Between brackets is the number of accepted species
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2 Shows the number of accepted species within the taxon
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- Biota
- Kingdom Animalia
- Kingdom Archaea
- Kingdom Bacteria
- Kingdom Chromista
- Kingdom Fungi
- Phylum Aphelida accepted as Aphelidiomycota
- Phylum Aphelidiomycota
- Phylum Ascomycota
- Class Archaeorhizomycetes
- Class Arthoniomycetes
- Class Ascomycetes
- Class Ascomycota incertae sedis
- Class Ascomycotina incertae sedis
- Class Dothideomycetes
- Class Eurotiomycetes
- Class Geoglossomycetes
- Class Laboulbeniomycetes
- Class Lecanoromycetes
- Class Leotiomycetes
- Class Lichinomycetes
- Class Neolectomycetes
- Class Orbiliomycetes
- Class Pezizomycetes
- Class Pneumocystidomycetes
- Class Saccharomycetes
- Class Sareomycetes
- Class Schizosaccharomycetes
- Class Sordariomycetes
- Order Amphisphaeriales
- Order Annulatascales
- Order Boliniales
- Order Calosphaeriales
- Order Cancellidiales
- Order Chaetosphaeriales
- Order Coniochaetales
- Order Coronophorales
- Order Diaporthales
- Order Hypocreales
- Order Hypocreomycetidae incertae sedis
- Order Jobellisiales
- Order Lulworthiales
- Order Melanosporales
- Order Microascales
- Family Ceratocystidaceae
- Family Chadefaudiellaceae
- Family Halosphaeriaceae E. Müller & Arx ex Kohlmeyer, 1951
- Genus Aniptodera Shearer & Miller, 1977
- Genus Anisostagma K.R.L. Petersen & J. Koch, 1996
- Genus Antennospora Meyers, 1957
- Genus Apherulina
- Genus Appendichordella R.G. Johnson, E.B.G. Jones & S.T. Moss, 1987
- Genus Arenariomyces Höhnk, 1954
- Genus Ascoglobospora Abdel-Wahab, 2024
- Genus Ascosacculus J. Campbell, J.L. Anderson & C.A. Shearer, 2003
- Genus Ascosalsum J. Campbell, J.L. Anderson & C.A. Shearer, 2003 accepted as Oceanitis J. Kohlmeyer, 1977
- Genus Bathyascus J. Kohlmeyer, 1977
- Genus Bovicornua J. Koch & E.B.G. Jones in M. Yusoff et al., 1993
- Genus Buxetroldia K.R.L. Petersen & J. Koch, 1997
- Genus Carbosphaerella I. Schmidt, 1969
- Genus Ceriosporella A.R. Cavaliere, 1966
- Genus Ceriosporopsis Linder, 1944
- Species Ceriosporopsis caduca E.B.G. Jones & Zainal, 1988
- Species Ceriosporopsis calyptrata Kohlmeyer, 1960
- Species Ceriosporopsis cambrensis I.M. Wilson, 1954
- Species Ceriosporopsis capillacea Kohlm., 1981
- Species Ceriosporopsis circumvestita (Kohlm.) Kohlm., 1972
- Species Ceriosporopsis halima Linder, 1944
- Species Ceriosporopsis hamata Höhnk, 1955 accepted as Remispora hamata (Höhnk) Kohlm., 1961
- Species Ceriosporopsis longissima Kohlm., 1962
- Species Ceriosporopsis submarina (Linder) E. Müll., 1962 accepted as Lentescospora submarina Linder, 1944
- Species Ceriosporopsis sundica Jørg. Koch & E.B.G. Jones, 1986 accepted as Limacospora sundica (Jørg. Koch & E.B.G. Jones) Jørg. Koch & E.B.G. Jones, 1995
- Species Ceriosporopsis tubulifera (Kohlm.) P.W. Kirk ex Kohlm., 1972 accepted as Halosphaeria tubulifera Kohlmeyer, 1960
- Genus Chadefaudia G. Feldmann-Mazoyer, 1957
- Genus Chaedofaudia accepted as Chadefaudia G. Feldmann-Mazoyer, 1957
- Genus Cirrenalia Meyers & R.T. Moore, 1960
- Genus Clavatospora Sv. Nilsson ex Marvanová & Sv. Nilsson, 1971
- Genus Corallicola B. Volkmann-Kohlmeyer & J. Kohlmeyer, 1992
- Genus Corollospora Werdermann, 1922
- Genus Cucullospora K.D. Hyde & E.B.G. Jones, 1986 accepted as Cucullosporella K.D. Hyde & E.B.G. Jones in E.B.G. Jones & K.D. Hyde, 1990
- Genus Cucullosporella K.D. Hyde & E.B.G. Jones in E.B.G. Jones & K.D. Hyde, 1990
- Genus Cucurbitinus L.-L. Liu et al., 2020
- Genus Culcitalna Meyers & R.T. Moore, 1960
- Genus Falcatispora K.L. Pang & E.B.G. Jones, 2003 accepted as Oceanitis J. Kohlmeyer, 1977
- Genus Fluviatispora K.D. Hyde, 1994
- Genus Haiyanga K.L. Pang & E.B.G. Jones, 2008
- Genus Haligena J. Kohlmeyer, 1961
- Genus Halosarpheia J. Kohlmeyer & E. Kohlmeyer, 1977
- Genus Halosigmoidea A. Nakagiri, K.L. Pang & E.B.G. Jones, 2009
- Genus Halosigmoidea Nakagiri, K.L. Pang & E.B.G. Jones, 2009
- Genus Halosphaeria Linder, 1944
- Genus Halosphaeriopsis T.W. Johnson, 1958
- Genus Iwilsoniella E.B.G. Jones, 1991
- Genus Jinshana K.L. Pang, M.W.L. Chiang & E.B.G. Jones, 2024
- Genus Lautisporopsis E.B.G. Jones, M. Yusoff & S.T. Moss in E.B.G. Jones, 1998
- Genus Lautosporopsis
- Genus Lignincola Höhnk, 1955
- Genus Ligninicola
- Genus Limacospora J. Koch & E.B.G. Jones in E.B.G. Jones et al., 1995
- Genus Littispora J. Campbell, J.L. Anderson & C.A. Shearer, 2003 accepted as Saagaromyces K.L. Pang & E.B.G. Jones in K.L. Pang et al., 2003
- Genus Luttrellia Shearer, 1978
- Genus Magnisphaera J. Campbell, J.L. Anderson & C.A. Shearer, 2003
- Genus Maireomyces J. Feldmann, 1941
- Genus Marinospora A.R. Cavaliere, 1966
- Genus Matsusphaeria K.L. Pang & E.B.G. Jones, 2003
- Genus Moana J. Kohlmeyer & B. Volkmann-Kohlmeyer, 1989
- Genus Morakotiella J. Sakayaroj, 2005
- Genus Mycophycophila A.B. Cribb & J.W. Cribb, 1960
- Genus Nais Kohlmeyer, 1962
- Genus Naïs Kohlmeyer, 1962 represented as Nais Kohlmeyer, 1962
- Genus Natantispora J. Campbell, J.L. Anderson & C.A. Shearer, 2003
- Genus Naufragella J. Kohlmeyer & B. Volkmann-Kohlmeyer, 1998
- Genus Nautosphaeria E.B.G. Jones, 1964
- Genus Neptunella K.L. Pang & E.B.G. Jones, 2003
- Genus Nereiospora E.B.G. Jones, R.G. Johnson & S.T. Moss, 1983
- Genus Nimbospora J. Koch, 1982
- Genus Nohea J. Kohlmeyer & B. Volkmann-Kohlmeyer, 1991
- Genus Oceanites J. Kohlmeyer, 1977 accepted as Oceanitis J. Kohlmeyer, 1977
- Genus Oceanitis J. Kohlmeyer, 1977
- Genus Ocostaspora E.B.G. Jones, R.G. Johnson & S.T. Moss, 1983
- Genus Okeanomyces K.L. Pang & E.B.G. Jones in K.L. Pang et al., 2004
- Genus Ondiniella E.B.G. Jones, R.G. Johnson & S.T. Moss, 1984
- Genus Ophiodeira J. Kohlmeyer & B. Volkmann-Kohlmeyer, 1988
- Genus Palomyces Höhnk, 1955
- Genus Panorbis J. Campbell, J.L. Anderson & C.A. Shearer, 2003
- Genus Peritrichospora Linder, 1944
- Genus Pseudolignincola Chatmala & E.B.G. Jones, 2006
- Genus Qarounispora A.A.H. Nourel-Din, F.A. Abdel-Aziz & M.A. Abdel-Wahab, 2022
- Genus Remispora Linder, 1944
- Genus Saagaromyces K.L. Pang & E.B.G. Jones in K.L. Pang et al., 2003
- Genus Sablecola E.B.G. Jones, K.L. Pang & L.L.P. Vrijmoed in K.L. Pang et al., 2004 accepted as Sablicola E.B.G. Jones, K.L. Pang & L.L.P. Vrijmoed in K.L. Pang et al., 2004
- Genus Sablicola E.B.G. Jones, K.L. Pang & L.L.P. Vrijmoed in K.L. Pang et al., 2004
- Genus Safagamyces M.S. Bakhit & M.A. Abdel-Wahab, 2022
- Genus Sigmoidea J.L. Crane, 1968
- Genus Thalassogena J. Kohlmeyer & B. Volkmann-Kohlmeyer, 1987
- Genus Thalespora Chatmala & E.B.G. Jones, 2006
- Genus Tirispora E.B.G. Jones & L.L.P. Vrijmoed in E.B.G. Jones et al., 1994
- Genus Toriella Sakayaroj, Pang & Jones, 2011
- Genus Trailia G.K. Sutherland, 1915
- Genus Trichomaris J. Hibbits, G.C. Hughes & A.K. Sparks, 1981
- Genus Tubakiella J. Sakayaroj, K.L. Pang & E.B.G. Jones, 2011
- Genus Tunicatispora K.D. Hyde, 1990
- Genus Varicosporina S.P. Meyers & Kohlmeyer, 1965
- Family Microascaceae
- Family Microascales incertae sedis
- Order Ophiostomatales
- Order Phomatosporales
- Order Phyllachorales
- Order Pisorisporiales
- Order Sordariales
- Order Sordariomycetes incertae sedis
- Order Sordariomycetidae incertae sedis
- Order Tirisporellales
- Order Trichosphaeriales
- Order Xylariales
- Order Xylariomycetidae incertae sedis
- Class Taphrinomycetes
- Class Xylonomycetes
- Phylum Basidiobolomycota accepted as Zygomycota
- Phylum Basidiomycota
- Phylum Blastocladiomycota
- Phylum Calcarisporiellomycota accepted as Zygomycota
- Phylum Caulochytriomycota accepted as Chytridiomycota
- Phylum Chytridiomycota
- Phylum Entomophthoromycota
- Phylum Fungi (awaiting allocation)
- Phylum Fungi incertae sedis
- Phylum Glomeromycota
- Phylum Kickxellomycota accepted as Zygomycota
- Phylum Monoblepharomycota accepted as Chytridiomycota
- Phylum Mortierellomycota accepted as Zygomycota
- Phylum Mucoromycota accepted as Zygomycota
- Phylum Nematophyta †
- Phylum Neocallimastigomycota accepted as Chytridiomycota
- Phylum Olpidiomycota accepted as Chytridiomycota
- Phylum Rozellomycota
- Phylum Zoopagomycota accepted as Zygomycota
- Phylum Zygomycota
- Genus Celluloxylon J.W. Dawson, 1881 † accepted as Prototaxites J.W. Dawson, 1859 †
- Genus Mucorites Meschinelli, 1898 † accepted as Mucorites Meschinelli ex Lindau, 1900 †
- Genus Mucorites Meschinelli ex Lindau, 1900 †
- Genus Mycelites W. Roux, 1887 †
- Genus Mycobystrovia Goujet & Locquin, 1979 †
- Genus Nematophycus Carruthers, 1872 † accepted as Prototaxites J.W. Dawson, 1859 †
- Genus Nematophyton J.W. Dawson, 1888 † accepted as Prototaxites J.W. Dawson, 1859 †
- Genus Ourasphaira C.C. Loron, R.H. Rainbird, E.C. Turner, J.W. Greenman & E.J. Javaux, 2019 †
- Genus Petsamomyces M.Y. Belova, 2006 †
- Genus Pilula S.D. Harker & W.A.S. Sarjeant in Harker et al., 1990 † accepted as Pilula S.D. Harker & W.A.S. Sarjeant ex S.D. Harker & W.A.S. Sarjeant, 1992 †
- Genus Pilula S.D. Harker & W.A.S. Sarjeant ex S.D. Harker & W.A.S. Sarjeant, 1992 †
- Genus Polycellaria H.D. Pflug, 1965 †
- Genus Prototaxites J.W. Dawson, 1859 †
- Genus Rhyniomycelium M. Krings & C.J. Harper, 2023 †
- Kingdom Plantae
- Kingdom Protista accepted as Protozoa
- Kingdom Protozoa
- Kingdom Viruses
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