Between brackets is the number of accepted species
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- Biota
- Kingdom Animalia
- Phylum Acanthocephala
- Phylum Agmata †
- Phylum Animalia (awaiting allocation)
- Phylum Animalia incertae sedis
- Phylum Annelida
- Phylum Arthropoda
- Phylum Brachiopoda
- Phylum Bryozoa
- Phylum Cephalorhyncha incertae sedis
- Phylum Chaetognatha
- Phylum Chitinozoa †
- Phylum Chordata
- Phylum Cnidaria
- Phylum Ctenophora
- Phylum Cycliophora
- Phylum Cycloneuralia incertae sedis
- Phylum Ecdysozoa incertae sedis †
- Phylum Echinodermata
- Phylum Entoprocta
- Phylum Gastrotricha
- Phylum Gnathostomulida
- Phylum Hemichordata
- Phylum Hyolitha †
- Phylum Kinorhyncha
- Phylum Lobopoda †
- Phylum Loricifera
- Phylum Micrognathozoa
- Phylum Mollusca
- Phylum Monoblastozoa accepted as Animalia incertae sedis
- Phylum Nematoda
- Phylum Nematomorpha
- Phylum Nemertea
- Phylum Onychophora
- Phylum Orthonectida
- Phylum Phoronida
- Phylum Placozoa
- Phylum Platyhelminthes
- Class Cestoda
- Order Amphilinidea
- Order Aporidea
- Order Bothriocephalidea
- Order Caryophyllidea
- Order Cathetocephalidea
- Order Cestoda (awaiting allocation)
- Order Cyclophyllidea
- Family Acoleidae Fuhrmann, 1899
- Family Acoleinidae Fuhrmann, 1907 accepted as Acoleidae Fuhrmann, 1899
- Family Amabiliidae Braun, 1900
- Family Anoplocephalidae Cholodkowsky, 1902
- Genus Adelataenia Beveridge, 1976 accepted as Progamotaenia Nybelin, 1918
- Genus Afrobaeria Haukisalmi, 2008
- Genus Afrojoyeuxia Haukisalmi, 2013
- Genus Aliezia Shinde, 1969 accepted as Stilesia Railliet, 1893
- Genus Anaplocephala Perrier, 1897 accepted as Anoplocephala Blanchard, 1848
- Genus Andrya Railliet, 1893
- Genus Anocephala Moniez, 1891 accepted as Anoplocephala Blanchard, 1848
- Genus Anootypus Woodland, 1928 accepted as Avitellina Gough, 1911
- Genus Anoplocepha Railliet, 1896 accepted as Anoplocephala Blanchard, 1848
- Genus Anoplocephala Blanchard, 1848
- Genus Anoplocephaloides Baer, 1925
- Genus Anoplocephalum Ladrerie, 1887 accepted as Anoplocephala Blanchard, 1848
- Genus Anoplocephalus Hendrick, 1895 accepted as Anoplocephala Blanchard, 1848
- Genus Aporina Fuhrmann, 1902
- Genus Aprostandrya Kirschenblat, 1938 accepted as Paranoplocephala Lühe in Brauer, 1910
- Genus Aprostatandrya Kirschenblatt, 1932 accepted as Paranoplocephala Lühe in Brauer, 1910
- Genus Arctocestus Haukisalmi, Hardman, Hoberg & Henttonen, 2014
- Genus Arhynchotaenia Pagenstecher, 1877 accepted as Inermicapsifer Janicki, 1910
- Genus Ascotaenia Baer, 1927 accepted as Avitellina Gough, 1911
- Genus Atriotaenia Sandground, 1926
- Genus Avitellina Gough, 1911
- Genus Baeriella Fuhrmann, 1932 accepted as Progamotaenia Nybelin, 1918
- Genus Baeriezia Skryabin & Schulz, 1937 accepted as Moniezia Blanchard, 1891
- Genus Beringitaenia Haukisalmi, Hardman, Hoberg & Henttonen, 2014
- Genus Berthia Parona, 1900 accepted as Bertiella Stiles & Hassall, 1902
- Genus Bertia Blanchard, 1891 accepted as Bertiella Stiles & Hassall, 1902
- Genus Bertiella Stiles & Hassall, 1902
- Genus Beveridgia Spasskii, 1988 accepted as Bertiella Stiles & Hassall, 1902
- Genus Biporonterina Burt, 1973
- Genus Biporouterina Burt, 1973 † accepted as Triuterina Fuhrmann, 1922
- Genus Blanchardiezia Skryabin & Schulz, 1937 accepted as Moniezia Blanchard, 1891
- Genus Blanchariezia accepted as Moniezia Blanchard, 1891
- Genus Bulbultaenia Beveridge, 1994
- Genus Chandleria Yamaguti, 1959 accepted as Mathevotaenia Akhumyan, 1946
- Genus Chionocestus Haukisalmi, Hardman, Hoberg & Henttonen, 2014
- Genus Cistotaenia Fuhrmann, 1901 accepted as Cittotaenia Riehm, 1881
- Genus Cittotaenia Riehm, 1881
- Genus Cittotoenia Sluiter & Swellengrebel, 1912 accepted as Cittotaenia Riehm, 1881
- Genus Cleberia Arandos Rêgo, 1967
- Genus Coelodela Shipley in Willey, 1900
- Genus Columbia Srivastava & Capoor, 1966 accepted as Killigrewia Meggitt, 1927
- Genus Cookiella Haukisalmi, Hardman, Hoberg & Henttonen, 2014
- Genus Crossotaenia Mahon, 1954
- Genus Ctenotaenia Railliet, 1893
- Genus Cycloskrjabinia Spasski in Skrjabin, 1951
- Genus Damanocephala Spassky & Buga, 2007
- Genus Diandrya Darrah, 1930
- Genus Diochetos Harwood, 1932 accepted as Oochoristica Lühe, 1898
- Genus Diuterinotaenia Gvosdev, 1961
- Genus Doublesetina Srivastava & Srivastav, 1989
- Genus Douthittia Haukisalmi, Hardman, Hoberg & Henttonen, 2014
- Genus Echidnotaenia Beveridge, 1980
- Genus Ectopocephalium Rausch & Ohbayashi, 1974
- Genus Equinia Haukisalmi, 2009
- Genus Eranuides Semenova, 1973 accepted as Moniezia Blanchard, 1891
- Genus Ershovia Spasski in Skrjabin, 1951 accepted as Atriotaenia Sandground, 1926
- Genus Ersovia accepted as Atriotaenia Sandground, 1926
- Genus Eurotaenia Haukisalmi, Hardman, Hoberg & Henttonen, 2014
- Genus Flabelloskrjabinia Spasski in Skrjabin, 1951 accepted as Anoplocephaloides Baer, 1925
- Genus Francolina Capoor, Sawada, Bhalya & Rastogi, 1987
- Genus Fuhrmannella Baer, 1924 accepted as Moniezia Blanchard, 1891
- Genus Fuhrmannodes Strand, 1942 accepted as Progamotaenia Nybelin, 1918
- Genus Gallegoides Tenora & Mas-Coma, 1978
- Genus Gekkotaenia Bursey, Goldberg & Kraus, 2005
- Genus Genovia Haukisalmi, 2009
- Genus Gidhaia Johri, 1934 accepted as Taufikia Woodland, 1928
- Genus Gulyaevia Haukisalmi, Hardman, Hoberg & Henttonen, 2014
- Genus Hemiparonia Baer, 1925
- Genus Hepatotaenia Nybelin, 1917 accepted as Progamotaenia Nybelin, 1918
- Genus Hexastichorchis Blei, 1921 accepted as Avitellina Gough, 1911
- Genus Hexastichorichis Blei, 1922 accepted as Avitellina Gough, 1911
- Genus Hickmawia Spasskii, 1987
- Genus Himalaya Malhotra, Capoor & Ghildiyal, 1983 (later usage?) accepted as Mosgovoyia Spasski, 1951
- Genus Himalaya Malhotra, Sawada & Capoor, 1983 accepted as Mosgovoyia Spasski, 1951
- Genus Hunkeleriella Haukisalmi, 2013
- Genus Hyracotaenia Beddard, 1912 accepted as Inermicapsifer Janicki, 1910
- Genus Indotaenia Singh, 1962 accepted as Bertiella Stiles & Hassall, 1902
- Genus Inermicapsifer Janicki, 1910
- Genus Inversa Spassky in Skrjabin, 1951 accepted as Mathevotaenia Akhumyan, 1946
- Genus Inversia Spasski in Skrjabin, 1951 accepted as Mathevotaenia Akhumyan, 1946
- Genus Killigrewia Meggitt, 1927
- Genus Lemminia Haukisalmi, Hardman, Hoberg & Henttonen, 2014
- Genus Lentiella Arandas Rêgo, 1964 accepted as Monoecocestus Beddard, 1914
- Genus Leporidotaenia Genov, Murai, Georgiev & Harris, 1990 accepted as Anoplocephaloides Baer, 1925
- Genus Linstoparonia Spasskii, 1987 accepted as Mathevotaenia Akhumyan, 1946
- Genus Linstowia Zschokke, 1898
- Genus Mangustella Spasskii, 1987 accepted as Mathevotaenia Akhumyan, 1946
- Genus Markewitschitaenia Sharpilo & Kornyushin in Bienek & Grundman, 1973 accepted as Mathevotaenia Akhumyan, 1946
- Genus Marmotocephala Gvozdev, Zhigileva & Gulyaev, 2004
- Genus Mathevotaenia Akhumyan, 1946
- Genus Megacapsula Wahid, 1961 accepted as Oochoristica Lühe, 1898
- Genus Metacapsifer Spasski in Skrjabin, 1951
- Genus Microcephaloides Haukisalmi, Hardman, Hardman, Rausch & Henttonen, 2008
- Genus Microticola Haukisalmi, Hardman, Hoberg & Henttonen, 2014
- Genus Moniezioides Fuhrmann in Kükenthal & Krumbach, 1931 accepted as Moniezoides Fuhrmann, 1918
- Genus Moniezoides Fuhrmann, 1918
- Genus Moniezoïdes Fuhrmann, 1918 accepted as Moniezoides Fuhrmann, 1918
- Genus Monoecocestus Beddard, 1914
- Genus Morosovella Spasski in Skrjabin, 1951 accepted as Mathevotaenia Akhumyan, 1946
- Genus Mosgovoyia Spasski, 1951
- Genus Mosogovoyia accepted as Mosgovoyia Spasski, 1951
- Genus Multicapsiferina Fuhrmann, 1922
- Genus Neandrya Haukisalmi & Wickström, 2005
- Genus Neoaporina Saxena & Baugh, 1973
- Genus Neoctenia Tenora, 1976 † accepted as Mosgovoyia Spasski, 1951
- Genus Neoctenotaenia Tenora, 1976 † accepted as Mosgovoyia Spasski, 1951
- Genus Neophronia Saxena, 1968 accepted as Taufikia Woodland, 1928
- Genus Nepalesia Sharma, 1943 accepted as Killigrewia Meggitt, 1927
- Genus Oochoristica Lühe, 1898
- Genus Opossumia Spasski in Skrjabin, 1951 accepted as Mathevotaenia Akhumyan, 1946
- Genus Panceria Sonsino, 1895 accepted as Panceriella Stunkard, 1969
- Genus Panceriella Stunkard, 1969
- Genus Pancerina Fuhrmann, 1899 accepted as Panceriella Stunkard, 1969
- Genus Parabertiella Nybelin, 1918 accepted as Bertiella Stiles & Hassall, 1902
- Genus Paralinstowia Baer, 1927
- Genus Paramonieza
- Genus Paramoniezia Maplestone & Southwell, 1923
- Genus Parandrya Gulyaev & Chechulin, 1996
- Genus Paranoplocephala Lühe in Brauer, 1910
- Genus Paranoplocephaloides Gulyaev, 1996
- Genus Parasciurotaenia Haukisalmi, 2009
- Genus Paratriotaenia Stunkard, 1965 accepted as Mathevotaenia Akhumyan, 1946
- Genus Parauaplocephala Fuhrmann in Kükenthal & Krumbach, 1930 accepted as Paranoplocephala Lühe in Brauer, 1910
- Genus Paronia Diamare, 1900
- Genus Paucicapsula Kugi, 1993
- Species Paucicapsula amamiensis Kugi, 1993
- Genus Pecarezia Spassky, 1999 accepted as Monoecocestus Beddard, 1914
- Genus Peramelinia Spasskii, 1987 accepted as Linstowia Zschokke, 1898
- Genus Pericapsifer Spasski in Skrjabin, 1951
- Genus Perutaenia Parra, 1953 accepted as Monoecocestus Beddard, 1914
- Genus Phascolocestus Beveridge, 2014
- Genus Phascolotaenia Beveridge, 1976
- Genus Plagiotaenia Peters, 1871 accepted as Anoplocephala Blanchard, 1848
- Genus Plagotaenia Blanchard, 1891 accepted as Anoplocephala Blanchard, 1848
- Genus Priodontia Spasskii, 1987 accepted as Mathevotaenia Akhumyan, 1946
- Genus Pritchardia Gardner, Jiménez Ruiz & Campbell, 2013
- Genus Progamotaenia Nybelin, 1918
- Genus Prototaenia Baer, 1927 accepted as Bertiella Stiles & Hassall, 1902
- Genus Pseudoaporina Saxena & Baugh, 1973 accepted as Killigrewia Meggitt, 1927
- Genus Pseudocittotaenia Tenora, 1976 †
- Genus Pseudolinstowia Spasskij, 1987 accepted as Paralinstowia Baer, 1927
- Genus Pseudosemenoviella Ceccolini & Cianferoni, 2021
- Genus Pseudosittotaenia Tenora, 1976 † accepted as Pseudocittotaenia Tenora, 1976 †
- Genus Pulluterina Smithers, 1954
- Genus Rauschoides Haukisalmi, Hardman, Hoberg & Henttonen, 2014
- Genus Rodentocestus Haukisalmi, Hardman, Hoberg & Henttonen, 2014
- Genus Schizorchis Hansen, 1948
- Genus Schizorchodes Bienek & Grundmann, 1973
- Genus Schizotaenia Janicki, 1904 accepted as Monoecocestus Beddard, 1914
- Genus Sciurotaenia Haukisalmi, 2009
- Genus Semenochetos Palladwar & Kalyankar, 1989 accepted as Oochoristica Lühe, 1898
- Genus Semenoviella Spasski in Skrjabin, 1951 accepted as Pseudosemenoviella Ceccolini & Cianferoni, 2021
- Genus Sharpilia Spasskii, 1988 accepted as Oochoristica Lühe, 1898
- Genus Shindeia Gaikwad & Shinde, 1985
- Genus Shindeoandrya Shinde, Mahajan, Mahajan & Begum, 1999
- Genus Sinaiotaenia Wertheim & Greenberg, 1971
- Genus Skrjabinochora Spassky, 1948 accepted as Oochoristica Lühe, 1898
- Genus Spasskofuhrmina Palladwar & Kalyankar, 1989
- Genus Stilesia Railliet, 1893
- Genus Stringopotaenia Beveridge, 1978
- Genus Sudarikovina Spasski in Skrjabin, 1951
- Genus Taufikia Woodland, 1928
- Genus Tenoraia Haukisalmi, Hardman, Hoberg & Henttonen, 2014
- Genus Thysanomum Railliet, 1896 accepted as Thysanosoma Diesing, 1835
- Genus Thysanosoma Diesing, 1835
- Genus Thysanosomum Galli-Valerio, 1897 accepted as Thysanosoma Diesing, 1835
- Genus Thysanotaenia Beddard, 1911
- Genus Timorenia Spasskii, 1987
- Genus Triuterina Fuhrmann, 1922
- Genus Tupaiataenia Schmidt & File, 1977 †
- Genus Vasoramia Spasskii, 1987 accepted as Mathevotaenia Akhumyan, 1946
- Genus Viscachataenia Denegri, Dopchiz, Elissondo & Beveridge, 2003
- Genus Wallabicestus Schmidt, 1975 accepted as Progamotaenia Nybelin, 1918
- Genus Witenbergitaenia Wertheim, Schmidt & Greenberg, 1986
- Genus Wyominia Scott, 1941
- Genus Zschokkea Fuhrmann, 1902
- Genus Zschokkeella Ransom, 1909
- Family Catenotaeniidae Spassky, 1949
- Family Confluariidae accepted as Hymenolepididae Ariola, 1899
- Family Cyclophyllidea (awaiting allocation)
- Family Dactylopsilophilidae accepted as Dilepididae Fuhrmann, 1907
- Family Davaineidae Braun, 1900
- Family Dilepididae Fuhrmann, 1907
- Family Dioecocestidae Southwell, 1930
- Family Diploposthidae Poche, 1926
- Family Dipylidiidae Stiles, 1896
- Family Echinocotylidae Ariola, 1897 accepted as Hymenolepididae Ariola, 1899
- Family Gryporhynchidae Spassky & Spasskaya, 1973
- Family Hymenolepidae
- Family Hymenolepididae Ariola, 1899
- Family Lecanicephalidea incertae sedis
- Family Mesocestoidae Perrier, 1897 accepted as Mesocestoididae Perrier, 1897
- Family Mesocestoididae Perrier, 1897
- Family Metadilepidae Spassky, 1959
- Family Metadilepididae
- Family Nematotaeniidae Lühe, 1910
- Family Paruterinidae Fuhrmann, 1907
- Family Polycephalidae
- Family Progynotaenidae Fuhrmann, 1936 accepted as Progynotaeniidae Fuhrmann, 1936
- Family Progynotaeniidae Fuhrmann, 1936
- Family Schistotaeniidae Johri, 1959
- Family Taeniidae Ludwig, 1886
- Family Tetrabothridae accepted as Tetrabothriidae Linton, 1891
- Family Tetrabothriidae Linton, 1891
- Family Triplotaeniidae
- Order Diphyllidea
- Order Diphyllobothriidea
- Order Eucestoda (awaiting allocation)
- Order Eucestoda incertae sedis
- Order Gyrocotylidea
- Order Haplobothriidea
- Order Lecanicephalidea
- Order Litobothridea accepted as Tetraphyllidea
- Order Nippotaeniidea
- Order Onchoproteocephalidea
- Order Phyllobothriidea
- Order Proteocephalidea
- Order Pseudophyllidea accepted as Cestoda
- Order Rhinebothriidea
- Order Seriata
- Order Spathebothriidea
- Order Tetraphyllidea
- Order Trypanorhyncha
- Genus Dactylobothrium Srivastav, Khare & Jadhav, 2006
- Genus Furia Linnaeus, 1758
- Class Platyhelminthes (awaiting allocation)
- Class Platyhelminthes incertae sedis
- Class Trematoda
- Class Turbellaria
- Phylum Pogonophora accepted as Siboglinidae Caullery, 1914
- Phylum Porifera
- Phylum Priapula accepted as Priapulida
- Phylum Priapulida
- Phylum Problematica † accepted as Animalia incertae sedis
- Phylum Rhombozoa
- Phylum Rotifera
- Phylum Scalidophora incertae sedis
- Phylum Sipuncula
- Phylum Tardigrada
- Phylum Trace fossils †
- Phylum Vendobionta †
- Phylum Vestimentifera accepted as Siboglinidae Caullery, 1914
- Phylum Vetulicolia †
- Phylum Vinctiplicata incertae sedis †
- Phylum Xenacoelomorpha
- Genus Trilobocaris Pribyl, 1953 †
- Kingdom Archaea
- Kingdom Bacteria
- Kingdom Chromista
- Kingdom Fungi
- Kingdom Plantae
- Kingdom Protista accepted as Protozoa
- Kingdom Protozoa
- Kingdom Viruses
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