Between brackets is the number of accepted species
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2 Shows the number of accepted species within the taxon
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- Biota
- Kingdom Animalia
- Kingdom Archaea
- Kingdom Bacteria
- Kingdom Chromista
- Kingdom Fungi
- Phylum Aphelida accepted as Aphelidiomycota
- Phylum Aphelidiomycota
- Phylum Ascomycota
- Phylum Basidiobolomycota accepted as Zygomycota
- Phylum Basidiomycota
- Class Agaricomycetes
- Order Agaricales
- Order Agaricomycetes incertae sedis
- Family Agaricomycetes incertae sedis
- Genus Akenomyces G. Arnaud ex D. Hornby, 1984
- Genus Akenomyces G. Arnaud, 1954
- Genus Aldridgea Massee, 1892
- Genus Alloclavaria Dentinger & D.J. McLaughlin, 2007
- Genus Arthrodochium R.F. Castañeda Ruiz & W.B. Kendrick, 1990
- Genus Arualis B. Katz, 1980
- Genus Blasiphalia Redhead, 2007
- Genus Bresadolina W. Brinkmann, 1909 accepted as Cotylidia P. Karsten, 1881
- Genus Bridgeoporus T.J. Volk, H.H. Burdsall & J.F. Ammirati in H.H. Burdsall et al., 1996
- Genus Cenangiomyces B.J. Dyko & B.C. Sutton, 1979
- Genus Cilicia E.M. Fries, 1825
- Genus Contumyces Redhead, Moncalvo, Vilgalys & Lutzoni, 2002
- Genus Corneohydnum Lloyd, 1924
- Genus Corticomyces A.I. Romero & S.E. Lopez in A.I. Romero et al., 1989
- Genus Cotylidea accepted as Cotylidia P. Karsten, 1881
- Genus Cotylidia P. Karsten, 1881
- Genus Craterella Persoon, 1794 accepted as Cotylidia P. Karsten, 1881
- Genus Cruciger R. Kirschner & F. Oberwinkler, 1999
- Genus Cyphellostereum D.A. Reid, 1965
- Genus Dacryopsida Nees, 1816
- Genus Dendrosporomyces A. Nawawi, J. Webster & R.A. Davey, 1977
- Genus Druparia Rafinesque, 1808
- Genus Drupasia Rafinesque, 1809 accepted as Druparia Rafinesque, 1808
- Genus Ellula T.R. Nag Raj, 1980
- Genus Endoconia Rafinesque, 1819
- Genus Fauxtylostoma McGinty, 1923
- Genus Fibrillaria Sowerby, 1803
- Genus Fibulochlamys A.I. Romero & D. Cabral in A.I. Romero et al., 1989
- Genus Fibulocoela T.R. Nag Raj, 1978
- Genus Fibulotaeniella L. Marvanová & F. Bärlocher, 1988
- Genus Geotrichopsis S.S. Tzean & R.H. Estey, 1991
- Genus Gloeoradulum Rick, 1959
- Genus Gloeosynnema K.A. Seifert & G. Okada, 1988
- Genus Glomerulomyces A.I. Romero & S.E. Lopez in A.I. Romero et al., 1989
- Genus Glutinoagger A. Sivanesan & R. Watling, 1980
- Genus Granulina Velenovský, 1947
- Genus Granulocystis K. Hjortstam, 1986 accepted as Odonticium E. Parmasto, 1968
- Genus Heterobasidium Massee, 1889
- Genus Hyphobasidiofera K. Matsushima & T. Matsushima, 1996
- Genus Hypolyssus Persoon, 1825
- Genus Intextomyces J. Eriksson & L. Ryvarden, 1976
- Genus Jacobia Contu, 1998 accepted as Rickenella Raithelhuber, 1973
- Genus Jacobia Arnaud, 1952
- Genus Leifia J. Ginns, 1998 accepted as Odonticium E. Parmasto, 1968
- Genus Loreleia S.A. Redhead, J.M. Moncalvo, R. Vilgalys & F. Lutzoni, 2002
- Genus Masseerina Lloyd, 1920
- Genus Minimedusa Weresub & P.M. LeClair, 1971
- Genus Minostroscyta Hjortstam & Ryvarden, 2001
- Genus Mycodendron Massee, 1891
- Genus Myriococcum E.M. Fries, 1823
- Genus Myxodochium Arnaud, 1952
- Genus Nostoclavus Paulet, 1791
- Genus Nyctalina Arnaud, 1952
- Genus Odonticium E. Parmasto, 1968
- Genus Oxyporus (Bourdot & Galzin) Donk, 1933
- Genus Pagidospora Drechsler, 1960
- Genus Palaeoagaricites G.O. Poinar Jr. & R. Buckley, 2007 †
- Genus Paulia C.G. Lloyd, 1916 accepted as Xenosoma H. Sydow & P. Sydow, 1921
- Genus Peniophorella P.A. Karsten, 1889
- Genus Phlegmatium E.M. Fries, 1819
- Genus Pilacre E.M. Fries, 1825
- Genus Pneumatospora B.C. Sutton, A.J. Kuthubutheen & S. Muid, 1984
- Species Pneumatospora coronata B. Sutton & Alcorn ined. accepted as Pneumatospora obcoronata B. Sutton, Kuthub. & Muid, 1984
- Species Pneumatospora obcoronata B. Sutton, Kuthub. & Muid, 1984
- Genus Pseudasterodon Rick, 1959
- Genus Pycnovellomyces R.F. Castañeda Ruiz, 1987
- Genus Pyrisperma Rafinesque, 1808
- Genus Repetobasidium J. Eriksson, 1958
- Genus Resinicium E. Parmasto, 1968
- Genus Resinicum E. Parmasto, 1968 accepted as Resinicium E. Parmasto, 1968
- Genus Rickenella Raithelhuber, 1973
- Genus Riessia Fresenius, 1852
- Genus Riessiella W. Jülich, 1985
- Genus Rimella Rafinesque, 1819
- Genus Skvortzovia V.L.R. Bononi & K. Hjortstam in J. Hjorstam & V.L.R. Bononi, 1987
- Genus Stereophyllum P.A. Karsten, 1889 accepted as Cyphellostereum D.A. Reid, 1965
- Genus Timgrovea N.L. Bougher & M.A. Castellano, 1993
- Genus Titaeella G. Arnaud ex K. Ando & K. Tubaki, 1985
- Genus Trechinothus E.C. Martini & Trichies, 2004
- Genus Tricellulortus T. Matsushima, 1995 accepted as Minimedusa Weresub & P.M. LeClair, 1971
- Genus Tricladiomyces A. Nawawi, 1985
- Genus Trimitiella G.S. Dhingra, 2006 accepted as Trimitiella G.S. Dhingra, 2008
- Genus Trimitiella G.S. Dhingra, 2008
- Genus Tubulicrinopsis Hjortstam & Kotiranta, 2007
- Genus Volvycium Rafinesque, 1808
- Genus Xanthoporus Audet, 2010
- Genus Xenopus Penzig & P.A. Saccardo, 1901
- Genus Xenosoma H. Sydow & P. Sydow, 1921
- Order Agaricomycetidae incertae sedis
- Order Atheliales
- Order Auriculariales
- Order Boletales
- Order Cantharellales
- Order Corticiales
- Order Geastrales
- Order Gloeophyllales
- Order Gomphales
- Order Hymenochaetales
- Order Hysterangiales
- Order Phallales
- Order Polyporales
- Order Russulales
- Order Sebacinales
- Order Sistotremastrales
- Order Thelephorales
- Order Trechisporales
- Class Agaricostilbomycetes
- Class Atractiellomycetes
- Class Basidiomycota incertae sedis
- Class Classiculomycetes
- Class Cryptomycocolacomycetes
- Class Cystobasidiomycetes
- Class Dacrymycetes
- Class Entorrhizomycetes
- Class Exobasidiomycetes
- Class Geminibasidiomycetes
- Class Microbotryomycetes
- Class Mixiomycetes
- Class Pucciniomycetes
- Class Tremellomycetes
- Class Tritirachiomycetes
- Class Ustilaginomycetes
- Class Wallemiomycetes
- Phylum Blastocladiomycota
- Phylum Calcarisporiellomycota accepted as Zygomycota
- Phylum Caulochytriomycota accepted as Chytridiomycota
- Phylum Chytridiomycota
- Phylum Entomophthoromycota
- Phylum Fungi (awaiting allocation)
- Phylum Fungi incertae sedis
- Phylum Glomeromycota
- Phylum Kickxellomycota accepted as Zygomycota
- Phylum Monoblepharomycota accepted as Chytridiomycota
- Phylum Mortierellomycota accepted as Zygomycota
- Phylum Mucoromycota accepted as Zygomycota
- Phylum Nematophyta †
- Phylum Neocallimastigomycota accepted as Chytridiomycota
- Phylum Olpidiomycota accepted as Chytridiomycota
- Phylum Rozellomycota
- Phylum Zoopagomycota accepted as Zygomycota
- Phylum Zygomycota
- Genus Mucorites Meschinelli, 1898 † accepted as Mucorites Meschinelli ex Lindau, 1900 †
- Genus Mucorites Meschinelli ex Lindau, 1900 †
- Genus Mycelites W. Roux, 1887 †
- Genus Mycobystrovia Goujet & Locquin, 1979 †
- Genus Ourasphaira C.C. Loron, R.H. Rainbird, E.C. Turner, J.W. Greenman & E.J. Javaux, 2019 †
- Genus Petsamomyces M.Y. Belova, 2006 †
- Genus Pilula S.D. Harker & W.A.S. Sarjeant in Harker et al., 1990 † accepted as Pilula S.D. Harker & W.A.S. Sarjeant ex S.D. Harker & W.A.S. Sarjeant, 1992 †
- Genus Pilula S.D. Harker & W.A.S. Sarjeant ex S.D. Harker & W.A.S. Sarjeant, 1992 †
- Genus Polycellaria H.D. Pflug, 1965 †
- Genus Rhyniomycelium M. Krings & C.J. Harper, 2023 †
- Kingdom Plantae
- Kingdom Protista accepted as Protozoa
- Kingdom Protozoa
- Kingdom Viruses
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