Between brackets is the number of accepted species
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2 Shows the number of accepted species within the taxon
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- Biota
- Kingdom Animalia
- Kingdom Archaea
- Kingdom Bacteria
- Kingdom Chromista
- Kingdom Fungi
- Phylum Aphelida accepted as Aphelidiomycota
- Phylum Aphelidiomycota
- Phylum Ascomycota
- Class Archaeorhizomycetes
- Class Arthoniomycetes
- Class Ascomycetes
- Class Ascomycota incertae sedis
- Class Ascomycotina incertae sedis
- Class Dothideomycetes
- Class Eurotiomycetes
- Class Geoglossomycetes
- Class Laboulbeniomycetes
- Class Lecanoromycetes
- Class Leotiomycetes
- Class Lichinomycetes
- Class Neolectomycetes
- Class Orbiliomycetes
- Class Pezizomycetes
- Class Pneumocystidomycetes
- Class Saccharomycetes
- Class Sareomycetes
- Class Schizosaccharomycetes
- Class Sordariomycetes
- Order Amphisphaeriales
- Order Annulatascales
- Order Boliniales
- Order Calosphaeriales
- Order Cancellidiales
- Order Chaetosphaeriales
- Order Coniochaetales
- Order Coronophorales
- Order Diaporthales
- Order Hypocreales
- Family Bionectriaceae
- Family Clavicipitaceae (Lindau) Earle, 1901
- Family Cordycipitaceae
- Family Hypocreaceae
- Family Hypocreales incertae sedis
- Genus Acremonium Link, 1809
- Genus Acrostalagmus Corda, 1838
- Genus Apyrenium E.M. Fries, 1849
- Genus Aschersoniopsis Hennings, 1902 accepted as Munkia Spegazzini, 1886
- Genus Basitorula Arnaud, 1954 accepted as Gliomastix Guéguen, 1905
- Genus Battarrina (P.A. Saccardo) F.E. Clements & C.L. Shear, 1931
- Genus Calcarisporium Preuss, 1851
- Genus Cephaloblaston Ciferri, 1932
- Genus Cephalosporiopsis Peyronel, 1915
- Genus Cephalosporium Corda, 1839
- Genus Cephalothecium Corda, 1838
- Genus Dictyocatenula Finley & E.F. Morris, 1967
- Genus Dubiomyces C.G. Lloyd, 1921 accepted as Ustilaginoidea Brefeld, 1895
- Genus Emericellopsis J.F.H. Beyma, 1940
- Genus Endocreas G.J. Samuels & C.T. Rogerson, 1989 accepted as Valsonectria Spegazzini, 1881
- Genus Escovopsis J.J. Muchovej & T.M.C. Della Lucia, 1990
- Genus Eucephalosporium Ciferri, 1932
- Genus Fecundostilbum T.P. Devi & Chowdhry, 2009
- Genus Fuckelina P.A. Saccardo, 1875 accepted as Stachybotrys Corda, 1837
- Genus Geosmithia J.I. Pitt, 1979
- Genus Gliobotrys F. von Höhnel, 1902 accepted as Stachybotrys Corda, 1837
- Genus Gliomastix Guéguen, 1905
- Genus Godroniella P.A. Karsten, 1884 accepted as Myrothecium Tode, 1790
- Genus Gynonectria P. Döbbeler, 2012
- Genus Gyrostroma Naumov, 1914
- Genus Halonectria E.B.G. Jones, 1965
- Genus Haplotrichella Arnaud, 1954 accepted as Gliomastix Guéguen, 1905
- Genus Hapsidospora Malloch & Cain, 1970
- Genus Haptospora G.L. Barron, 1991
- Genus Hyalobotrys Pidoplichko, 1948 accepted as Stachybotrys Corda, 1837
- Genus Hyalopus Corda, 1838 accepted as Acremonium Link, 1809
- Genus Hyalostachybotrys Srinivasan, 1958 accepted as Stachybotrys Corda, 1837
- Genus Hyphelia E.M. Fries, 1825 accepted as Trichothecium Link, 1809
- Genus Hyphoderma E.M. Fries, 1849 accepted as Trichothecium Link, 1809
- Genus Igneocumulus A.W. Ramaley, 2003
- Genus Illosporiopsis D.L. Hawksworth in Sikaroodi et al., 2001
- Genus Illosporium C.F.P. Martius, 1817
- Genus Kaskaskia G.L. Born & J.L. Crane, 1972 accepted as Gyrostroma Naumov, 1914
- Genus Lepra Willdenow, 1787 accepted as Illosporium C.F.P. Martius, 1817
- Genus Loculistroma F. Patterson & Charles, 1910
- Genus Maffeiella Ciferri, 1932
- Genus Mastigocladium Matruchot, 1911 accepted as Acremonium Link, 1809
- Genus Melanopsamma Niessl, 1876
- Genus Memnoniella F. von Höhnel, 1923
- Genus Metadothella Hennings, 1904
- Genus Monoconidia E. Roze, 1897 accepted as Acremonium Link, 1809
- Genus Munkia Spegazzini, 1886
- Genus Mycomalus A. Møller, 1901
- Species Mycomalus bambusinus A. Møller, 1901
- Genus Myrmaeciella Lindau in Engler & Prantl, 1897
- Genus Myrmaecium P.A. Saccardo, 1880 accepted as Myrmaeciella Lindau in Engler & Prantl, 1897
- Genus Myrotheciella Spegazzini, 1910 accepted as Myrothecium Tode, 1790
- Genus Myrothecium Tode, 1790
- Genus Myxormia M.J. Berkeley & C.E. Broome, 1850 accepted as Myrothecium Tode, 1790
- Genus Nematomyces Faurel & Schotter, 1966 accepted as Gliomastix Guéguen, 1905
- Genus Neomunkia Petrak, 1947
- Genus Nigrosabulum D. Malloch & R.F. Cain, 1970
- Genus Paleoophiocordyceps G.-H. Sung, G.O. Poinar Jr. & J.W. Spatafora, 2008 †
- Genus Payosphaeria W.F. Leong in W.F. Leong et al., 1990
- Genus Peethambara C.V. Subramanian & D.J. Bhat, 1978
- Genus Peloronectria A. Møller, 1901
- Genus Peyronellula Malan, 1952 accepted as Emericellopsis J.F.H. Beyma, 1940
- Genus Phaeostilbella F. von Höhnel, 1919 accepted as Myrothecium Tode, 1790
- Genus Phialocladus H. Kreisel, 1972 accepted as Escovopsis J.J. Muchovej & T.M.C. Della Lucia, 1990
- Genus Porphyrosoma Patouillard, 1927
- Genus Pseudofusidium F.C. Deighton, 1969 accepted as Acremonium Link, 1809
- Genus Pseudomicrodochium B.C. Sutton, 1975
- Genus Pycnostroma F.E. Clements, 1909 accepted as Munkia Spegazzini, 1886
- Genus Romanoa Thirumalachar, 1954
- Genus Sarocladium W. Gams & D.L. Hawksworth, 1976
- Genus Saturnomyces Cain, 1956 accepted as Emericellopsis J.F.H. Beyma, 1940
- Genus Septomyrothecium Matsushima in Y. Kobayasi, 1971
- Genus Shropshiria F.L. Stevens, 1927 accepted as Munkia Spegazzini, 1886
- Genus Sorosporella N. Sorokin, 1888
- Genus Spicellum Nicot & Roquebert, 1976
- Genus Stachybotrys Corda, 1837
- Genus Starkeyomyces V. Agnihothrudu, 1956 accepted as Myrothecium Tode, 1790
- Genus Stilbella Lindau in Engler & Prantl, 1900
- Genus Stilbites Pia in M. Hirmer, 1927 †
- Genus Sulcatistroma A.W. Ramaley, 2005
- Genus Synsporium Preuss, 1849 accepted as Stachybotrys Corda, 1837
- Genus Tilachlidium Preuss, 1851
- Genus Torulina P.A. Saccardo & D. Saccardo, 1906 accepted as Gliomastix Guéguen, 1905
- Genus Torulopsis Oudemans, 1903 accepted as Gliomastix Guéguen, 1905
- Genus Trichodermia Hoffmann, 1795 accepted as Trichothecium Link, 1809
- Genus Trichotheciopsis J.M. Yen, 1979 accepted as Trichothecium Link, 1809
- Genus Trichothecium Link, 1809
- Genus Ustilaginoidea Brefeld, 1895
- Genus Valsonectria Spegazzini, 1881
- Family Nectriaceae
- Family Niessliaceae
- Family Ophiocordycipitaceae accepted as Cordycipitaceae
- Family Polycephalomycetaceae Y.P. Xiao, Y.B. Wang, T.C. Wen, H. Yu & K.D. Hyde, 2023
- Family Stilbellaceae accepted as Hypocreales incertae sedis
- Family Tuberculariaceae accepted as Nectriaceae
- Order Hypocreomycetidae incertae sedis
- Order Jobellisiales
- Order Lulworthiales
- Order Melanosporales
- Order Microascales
- Order Ophiostomatales
- Order Phomatosporales
- Order Phyllachorales
- Order Sordariales
- Order Sordariomycetes incertae sedis
- Order Sordariomycetidae incertae sedis
- Order Tirisporellales
- Order Trichosphaeriales
- Order Xylariales
- Order Xylariomycetidae incertae sedis
- Class Taphrinomycetes
- Class Xylonomycetes
- Phylum Basidiobolomycota accepted as Zygomycota
- Phylum Basidiomycota
- Phylum Blastocladiomycota
- Phylum Calcarisporiellomycota accepted as Zygomycota
- Phylum Caulochytriomycota accepted as Chytridiomycota
- Phylum Chytridiomycota
- Phylum Entomophthoromycota
- Phylum Fungi (awaiting allocation)
- Phylum Fungi incertae sedis
- Phylum Glomeromycota
- Phylum Kickxellomycota accepted as Zygomycota
- Phylum Monoblepharomycota accepted as Chytridiomycota
- Phylum Mortierellomycota accepted as Zygomycota
- Phylum Mucoromycota accepted as Zygomycota
- Phylum Nematophyta †
- Phylum Neocallimastigomycota accepted as Chytridiomycota
- Phylum Olpidiomycota accepted as Chytridiomycota
- Phylum Rozellomycota
- Phylum Zoopagomycota accepted as Zygomycota
- Phylum Zygomycota
- Genus Mucorites Meschinelli, 1898 † accepted as Mucorites Meschinelli ex Lindau, 1900 †
- Genus Mucorites Meschinelli ex Lindau, 1900 †
- Genus Mycelites W. Roux, 1887 †
- Genus Mycobystrovia Goujet & Locquin, 1979 †
- Genus Ourasphaira C.C. Loron, R.H. Rainbird, E.C. Turner, J.W. Greenman & E.J. Javaux, 2019 †
- Genus Rhyniomycelium M. Krings & C.J. Harper, 2023 †
- Genus Tappania Yin, 1997 †
- Kingdom Plantae
- Kingdom Protista accepted as Protozoa
- Kingdom Protozoa
- Kingdom Viruses
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