Acerviclypeatus R.T. Hanlin, 1990 (basis of record)
Actinothyrium Kunze in Kunze & Schmidt, 1823 (basis of record)
Apioclypea K.D. Hyde, 1994 (basis of record)
Bakerophoma Diedicke, 1916 (basis of record)
Camarosporellum Tassi, 1902 (basis of record)
Cerion Massee, 1901 (basis of record)
Ceuthocarpon P.A. Karsten, 1873 accepted as Linospora Fuckel, 1870 (basis of record)
Chaetomelasmia Danilova in N.A. Naumov & Danilova, 1951 accepted as Diachorella F. von Höhnel, 1918 (basis of record)
Chlamydosporium Peyronel, 1913 accepted as Phoma P.A. Saccardo, 1880 (basis of record)
Crandallia J.B. Ellis & P.A. Saccardo, 1897 (basis of record)
Cyclodomus F. von Höhnel, 1909 (basis of record)
Duplicaria Fuckel, 1870 (basis of record)
Epiphyma Theissen, 1916 accepted as Botryosphaeria Cesati & G. De Notaris, 1863 (basis of record)
Fremitomyces P.F. Cannon & H.C. Evans, 1999 (basis of record)
Gibellia P.A. Saccardo, 1885 (basis of record)
Gibellina Passerini, 1886 (basis of record)
Gloeodes Colby, 1920 (basis of record)
Haloguignardia A.B. Cribb & J.W. Cribb, 1956 (basis of record)
Helostroma N. Patouillard, 1902 accepted as Microstroma Niessl, 1861 (basis of record)
Hendersonulina Tassi, 1902 (basis of record)
Hyalodothis Patouillard & Hariot, 1893 accepted as Melanodothis R.H. Arnold, 1972 (basis of record)
Hypodermium Link, 1816 accepted as Caeoma Link, 1809 (basis of record)
Hypopteris Berkeley, 1854 accepted as Apiospora P.A. Saccardo, 1875 (basis of record)
Irenina F.L. Stevens, 1927 accepted as Appendiculella F. von Höhnel, 1919 (basis of record)
Leptothyrina F. von Höhnel, 1915 (basis of record)
Lindauella Rehm, 1900 (basis of record)
Linochora F. von Höhnel, 1910 (basis of record)
Macroderma F. von Höhnel, 1917 (basis of record)
Maculatifrondes K.D. Hyde, 1996 (basis of record)
Mangrovispora K.D. Hyde & Nakagiri, 1991 (basis of record)
Marchalia P.A. Saccardo, 1889 (basis of record)
Marthamyces Minter, 2003 (basis of record)
Monorhiza Theissen & H. Sydow, 1915 accepted as Rhagadolobium P.C. Hennings & Lindau, 1896 (basis of record)
Moutoniella Penzig & P.A. Saccardo, 1901 (basis of record)
Mycohypallage B.C. Sutton, 1963 (basis of record)
Neobarclaya P.A. Saccardo in P.A. Saccardo & P. Sydow, 1899 (basis of record)
Neococcomyces Y.R. Lin, C.T. Xiang & Z.Z. Li in Y.R. Lin et al., 1999 (basis of record)
Nothorhytisma D.W. Minter, P.F. Cannon, A.I. Romero & H.L. Peredo, 1998 (basis of record)
Operculella Kheswalla, 1941 accepted as Phacidiopycnis Potebnia, 1912 (basis of record)
Oswaldina E. Rangel, 1921 (basis of record)
Palmomyces Maire, 1926 accepted as Andreaeana B.T. Palm & S.C.J. Jochems, 1924 (basis of record)
Paraphoma G. Morgan-Jones & J.F. White, 1983 accepted as Phoma P.A. Saccardo, 1880 (basis of record)
Parberya C.A. Pearce & K.D. Hyde, 2001 (basis of record)
Parvacoccum R.S. Hunt & A. Funk, 1988 (basis of record)
Phaeochoraceae (extant flag source)
Phaeochoraceae (basis of record)
Phomachorella Petrak, 1947 (basis of record)
Phycomelaina J. Kohlmeyer, 1968 (basis of record)
Phyllachorales incertae sedis (basis of record)
Phyllachorales incertae sedis (extant flag source)
Physosporella F. von Höhnel, 1919 (basis of record)
Plagiostigme H. Sydow, 1925 (basis of record)
Pleosporales incertae sedis (basis of record)
Pleurodiscula F. von Höhnel in Weese, 1926 (basis of record)
Pleurostromella Petrak, 1922 (basis of record)
Plurisperma A. Sivanesan, 1970 (basis of record)
Pocsia A. Vezda, 1975 (basis of record)
Polyopeus A.S. Horne, 1920 accepted as Phoma P.A. Saccardo, 1880 (basis of record)
Pterosporidium W.H. Ho & K.D. Hyde, 1996 (basis of record)
Pyrenochaeta De Notaris, 1849 (basis of record)
Rhodosticta Woronichin, 1911 (basis of record)
Schizopeltis Batista & I.H. Lima, 1959 accepted as Schizothyrium Desmazières, 1849 (basis of record)
Schizotrichella E.F. Morris, 1956 accepted as Colletotrichum Corda in Sturm, 1833 (basis of record)
Sclerophomella F. von Höhnel, 1917 accepted as Phoma P.A. Saccardo, 1880 (basis of record)
Sclerostagonospora F. von Höhnel, 1917 accepted as Stagonospora (P.A. Saccardo) P.A. Saccardo, 1884 (basis of record)
Septochora von Höhnel, 1917 accepted as Helhonia B.C. Sutton, 1980? (basis of record)
Sirodothis F.E. Clements, 1909 (basis of record)
Sirozythia F. von Höhnel, 1904 (basis of record)
Sphaerodothella C.A. Pearce & K.D. Hyde, 2001 (basis of record)
Stagonospora (P.A. Saccardo) P.A. Saccardo, 1884 (basis of record)
Stagonostroma Diedicke, 1914 accepted as Fusarium Link, 1809 (basis of record)
Thyriostroma Diedicke, 1913 accepted as Leptostroma E.M. Fries, 1815 (basis of record)
Tryblidiopycnis F. von Höhnel, 1918 (basis of record)
Verrucariales incertae sedis (basis of record)
Verrucariales incertae sedis (extant flag source)
Xyloschizon H. Sydow in H. Sydow & Petrak, 1922 (basis of record)
Zeus D.W. Minter & S. Diamandis in D.W. Minter et al., 1987 (basis of record)